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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
323
ChIP-seq
Assay category
323
DNA binding
Target of assay
668
histone modification
667
histone
455
transcription factor
344
narrow histone mark
323
broad histone mark
271
control
93
RNA binding protein
89
recombinant protein
32
chromatin remodeller
5
nucleotide modification
5
other context
5
other post-translational modification
Date released
73
August, 2017
56
May, 2019
50
November, 2017
43
October, 2019
37
April, 2019
20
May, 2024
19
October, 2018
10
October, 2017
6
November, 2019
4
December, 2017
4
January, 2019
1
August, 2021
Available data
272
bigWig
271
bed narrowPeak
241
bam
214
bigBed narrowPeak
82
tagAlign
54
fastq
28
bed broadPeak
8
bigBed broadPeak
7
bed bed3+
Organism
319
Homo sapiens
Biosample type
303
tissue
primary cell
in vitro differentiated cells
19
cell line
1
stem cell
Organ
70
brain
57
heart
51
pancreas
36
blood vessel
36
vasculature
34
limb
34
liver
20
adipose tissue
20
connective tissue
16
musculature of body
16
nerve
14
artery
10
kidney
6
epithelium
4
spleen
Project
323
AMP
Genome assembly (visualization)
259
GRCh38
217
hg19
Lab
302
AMP-T2D consortium
20
Patrick T. Ellinor, Broad
1
Bing Ren, UCSD
Audit category:
6
inconsistent ontology term
Audit category:
4
missing controlled_by
Audit category:
10
inconsistent control read length
1
inconsistent assembly
assay_title!
Capture-C
biosample_type!
primary cell
in vitro differentiated cells
BIOSAMPLE
ASSAY
323 results
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Clear Filters
ChIP-seq
tissue
liver
22
left cardiac atrium
20
subcutaneous abdominal adipose tissue
20
tibial nerve
16
heart left ventricle
15
+ See 26 more…
cell line
HepG2
9
EndoC_BH1
6
Panc1
4
stem cell
hESC
1
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