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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
RRBS
Assay category
17
DNA methylation
Date released
13
July, 2019
4
August, 2017
Available data
417
bam
405
fastq
232
bigWig
184
bed narrowPeak
184
tsv
153
zippedFastqFolder
152
tagAlign
76
txt
44
bigBed narrowPeak
40
bed broadPeak
18
bigBed broadPeak
17
bed bedMethyl
17
bigBed bedMethyl
17
hic
16
bedpe bed3+
11
bed bed3+
10
bed bed3
8
csv
6
bed bedgraph
4
hdf5
4
tar
3
cool
1
bedpe
1
vcf
Organism
17
Homo sapiens
Biosample type
9
tissue
8
primary cell
Organ
5
epithelium
3
kidney
3
musculature of body
2
brain
2
liver
2
pancreas
1
eye
1
heart
1
pericardium
1
vasculature
Project
17
AMP
Genome assembly (visualization)
GRCh38
17
hg19
Lab
17
AMP-T2D consortium
Audit category:
inconsistent ontology term
assay_title!
Capture-C
audit.ERROR.category!
inconsistent ontology term
assembly!
GRCh38
BIOSAMPLE
ASSAY
17 results
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RRBS
tissue
skeletal muscle tissue
2
brain
1
heart left ventricle
1
islet of Langerhans
1
kidney
1
+ See 3 more…
primary cell
cardiac muscle cell
1
choroid plexus epithelial cell
1
hepatocyte
1
kidney epithelial cell
1
renal cortical epithelial cell
1
+ See 3 more…
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