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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
RRBS
11
WGBS
Assay category
27
DNA methylation
Date released
14
July, 2019
7
November, 2018
6
August, 2017
Available data
2974
bam
2757
bigWig
1567
bed narrowPeak
1347
fastq
1282
tsv
928
bigBed narrowPeak
389
tagAlign
289
bed broadPeak
252
bigBed broadPeak
236
bed bed3+
153
zippedFastqFolder
76
txt
64
xls
27
bed bedMethyl
27
bigBed bedMethyl
15
hic
13
bedpe bed3+
12
bed bed3
8
csv
6
bed bedgraph
5
hdf5
4
tar
3
cool
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
27
Homo sapiens
Biosample type
18
tissue
8
primary cell
1
cell line
Organ
heart
6
pancreas
5
epithelium
4
musculature of body
3
kidney
3
liver
2
adipose tissue
2
brain
2
connective tissue
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
27
AMP
Genome assembly (visualization)
16
hg19
11
GRCh38
Lab
27
AMP-T2D consortium
Audit category:
inconsistent ontology term
assay_title!
Capture-C
audit.ERROR.category!
inconsistent ontology term
organ_slims!
heart
BIOSAMPLE
ASSAY
27 results
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Clear Filters
RRBS
WGBS
tissue
pancreas
1
2
adipose tissue
2
body of pancreas
2
skeletal muscle tissue
2
spleen
2
+ See 7 more…
primary cell
cardiac muscle cell
1
choroid plexus epithelial cell
1
hepatocyte
1
kidney epithelial cell
1
renal cortical epithelial cell
1
+ See 3 more…
cell line
HepG2
1
See all biosamples
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