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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
RRBS
13
WGBS
Assay category
28
DNA methylation
Date released
19
July, 2019
6
August, 2017
3
November, 2018
Available data
2545
bam
2367
bigWig
1514
bed narrowPeak
1072
tsv
927
bigBed narrowPeak
881
fastq
376
tagAlign
297
bed broadPeak
274
bigBed broadPeak
236
bed bed3+
73
zippedFastqFolder
70
txt
64
xls
28
bed bedMethyl
28
bigBed bedMethyl
12
bed bed3
12
hic
10
bedpe bed3+
8
csv
6
bed bedgraph
4
hdf5
4
tar
1
tagAlign bed3+
1
vcf
Organism
28
Homo sapiens
Biosample type
19
tissue
8
primary cell
1
cell line
Organ
7
heart
pancreas
5
epithelium
4
musculature of body
3
kidney
3
liver
2
adipose tissue
2
brain
2
connective tissue
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
28
AMP
Genome assembly (visualization)
15
hg19
13
GRCh38
Lab
28
AMP-T2D consortium
Audit category:
inconsistent ontology term
assay_title!
Capture-C
audit.ERROR.category!
inconsistent ontology term
organ_slims!
pancreas
BIOSAMPLE
ASSAY
28 results
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RRBS
WGBS
tissue
heart left ventricle
1
2
adipose tissue
2
heart right ventricle
2
skeletal muscle tissue
2
spleen
2
+ See 8 more…
primary cell
cardiac muscle cell
1
choroid plexus epithelial cell
1
hepatocyte
1
kidney epithelial cell
1
renal cortical epithelial cell
1
+ See 3 more…
cell line
HepG2
1
See all biosamples
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