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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
ChIP-seq
4
total RNA-seq
3
DNase-seq
1
RRBS
Assay category
5
DNA binding
4
Transcription
3
DNA accessibility
1
DNA methylation
Target of assay
2
control
2
histone
2
histone modification
2
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
8
June, 2019
5
July, 2019
Available data
12
bam
10
bigWig
6
bed narrowPeak
6
bigBed narrowPeak
4
tsv
3
bed bed3+
3
bed broadPeak
3
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
13
Homo sapiens
Biosample type
311
tissue
66
cell line
13
primary cell
Organ
406
epithelium
346
pancreas
38
connective tissue
37
vasculature
36
kidney
31
blood vessel
22
vein
21
brain
14
liver
14
musculature of body
13
heart
8
blood
8
bodily fluid
5
eye
2
adipose tissue
2
artery
1
pericardium
Project
13
AMP
Genome assembly (visualization)
10
GRCh38
10
hg19
Lab
13
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
assay_title!
Capture-C
month_released!
May, 2021
BIOSAMPLE
ASSAY
13 results
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ChIP-seq
total RNA-seq
DNase-seq
RRBS
primary cell
cardiac fibroblast
5
3
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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