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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
total RNA-seq
21
ATAC-seq
4
ChIP-seq
Assay category
41
Transcription
21
DNA accessibility
4
DNA binding
Target of assay
2
histone
2
histone modification
2
narrow histone mark
1
control
1
transcription factor
Date released
188
August, 2017
157
July, 2018
104
May, 2022
72
September, 2018
61
May, 2021
56
February, 2023
55
November, 2019
53
October, 2018
39
April, 2018
32
February, 2021
19
September, 2020
18
October, 2019
14
March, 2020
11
September, 2017
10
November, 2020
8
January, 2021
7
August, 2020
7
November, 2018
6
July, 2019
5
March, 2019
5
October, 2017
4
June, 2019
3
August, 2018
3
October, 2022
2
August, 2021
2
May, 2019
1
August, 2022
1
February, 2020
1
June, 2018
Available data
48
bam
48
bigWig
40
tsv
7
bed narrowPeak
5
fastq
3
tagAlign
1
bed broadPeak
Organism
66
Homo sapiens
Biosample type
42
tissue
21
cell line
3
in vitro differentiated cells
Organ
66
pancreas
26
epithelium
16
brain
3
connective tissue
3
heart
2
embryo
1
adipose tissue
1
bone element
1
bone marrow
1
spleen
1
thymus
Project
65
AMP
1
T1D
Genome assembly (visualization)
48
GRCh38
48
hg19
Lab
64
AMP-T2D consortium
1
Kyle Gaulton, UCSD
1
Stephen Parker, UMich
Audit category:
21
inconsistent ontology term
assay_title!
Capture-C
BIOSAMPLE
ASSAY
66 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
tissue
islet of Langerhans
36
1
body of pancreas
4
pancreas
1
cell line
EndoC_BH1
4
16
1
in vitro differentiated cells
pancreatic PP cell
3
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