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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
Hi-C
Assay category
5
3D chromatin structure
Date released
4
July, 2019
1
October, 2019
Available data
1605
bam
1600
tsv
1570
bigWig
489
fastq
283
bed narrowPeak
161
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
32
bigBed narrowPeak
23
bedpe bed3+
23
hic
16
bed bed3+
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
3
cool
2
bed broadPeak
2
ibed
1
bedpe
1
tar
1
vcf
Organism
5
Homo sapiens
Biosample type
4
primary cell
1
cell line
Organ
3
brain
2
blood vessel
2
epithelium
2
vasculature
1
connective tissue
1
liver
1
pancreas
Project
5
AMP
Genome assembly (visualization)
5
hg19
1
GRCh38
Lab
5
AMP-T2D consortium
Audit category:
1
inconsistent assembly
assay_title!
DNase-seq
ChIP-seq
BIOSAMPLE
ASSAY
5 results
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Clear Filters
Hi-C
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
endothelial cell of hepatic sinusoid
1
cell line
Panc1
1
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