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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
74
ChIP-seq
3
Hi-C
2
total RNA-seq
1
MPRA
Assay category
74
DNA binding
3
3D chromatin structure
2
Transcription
Target of assay
30
histone
30
histone modification
29
control
19
broad histone mark
15
transcription factor
11
RNA binding protein
11
narrow histone mark
Date released
697
February, 2021
406
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
304
October, 2019
213
August, 2021
204
February, 2023
166
May, 2022
120
July, 2018
120
May, 2019
105
July, 2019
94
December, 2017
80
April, 2019
78
November, 2018
76
October, 2018
72
September, 2018
64
March, 2020
61
November, 2019
40
May, 2024
39
February, 2018
35
December, 2018
31
June, 2019
30
January, 2019
25
February, 2020
23
October, 2017
19
September, 2020
16
January, 2021
15
November, 2020
12
May, 2023
11
September, 2017
10
April, 2020
8
January, 2018
7
August, 2020
7
December, 2019
6
April, 2018
5
March, 2019
5
March, 2023
4
October, 2022
1
August, 2018
1
August, 2022
Available data
76
bam
60
fastq
47
bigWig
45
bed narrowPeak
45
bigBed narrowPeak
3
bedpe bed3+
3
cool
3
hic
2
tsv
1
txt
Organism
79
Homo sapiens
Biosample type
74
tissue
5
primary cell
1
cell line
Organ
56
pancreas
23
adipose tissue
23
connective tissue
5
epithelium
Project
77
AMP
3
HPAP
Genome assembly (visualization)
50
hg19
47
GRCh38
Lab
77
AMP-T2D consortium
3
Klaus Kaestner, Upenn
Audit category:
3
audit script error
Audit category:
1
inconsistent control read length
assay_title!
DNase-seq
single cell RNA-seq
BIOSAMPLE
ASSAY
80 results
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Clear Filters
ChIP-seq
Hi-C
total RNA-seq
MPRA
tissue
body of pancreas
33
endocrine pancreas
16
subcutaneous adipose tissue
12
omental fat pad
11
pancreas
2
primary cell
pancreatic acinar cell
1
2
pancreatic alpha cell
1
pancreatic beta cell
1
cell line
MIN6
1
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