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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
106
ChIP-seq
28
total RNA-seq
14
ATAC-seq
single cell RNA-seq
Assay category
106
DNA binding
28
Transcription
14
DNA accessibility
Target of assay
62
histone
62
histone modification
36
broad histone mark
29
control
26
narrow histone mark
15
transcription factor
11
RNA binding protein
Date released
697
February, 2021
406
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
304
October, 2019
213
August, 2021
204
February, 2023
166
May, 2022
120
July, 2018
120
May, 2019
105
July, 2019
94
December, 2017
80
April, 2019
78
November, 2018
76
October, 2018
72
September, 2018
64
March, 2020
61
November, 2019
40
May, 2024
39
February, 2018
35
December, 2018
31
June, 2019
30
January, 2019
25
February, 2020
23
October, 2017
19
September, 2020
16
January, 2021
15
November, 2020
12
May, 2023
11
September, 2017
10
April, 2020
8
January, 2018
7
August, 2020
7
December, 2019
6
April, 2018
5
March, 2019
5
March, 2023
4
October, 2022
1
August, 2018
1
August, 2022
Available data
148
bam
132
fastq
119
bigWig
91
bed narrowPeak
59
bigBed narrowPeak
28
tsv
Organism
148
Homo sapiens
Biosample type
74
primary cell
74
tissue
Organ
125
pancreas
63
epithelium
23
adipose tissue
23
connective tissue
Project
148
AMP
Genome assembly (visualization)
119
GRCh38
119
hg19
Lab
148
AMP-T2D consortium
Audit category:
32
missing controlled_by
Audit category:
1
inconsistent control read length
assay_title!
DNase-seq
single cell RNA-seq
BIOSAMPLE
ASSAY
148 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
primary cell
pancreatic ductal cell
13
4
4
pancreatic acinar cell
8
4
3
pancreatic beta cell
10
4
pancreatic alpha cell
10
3
pancreatic endocrine cell
11
tissue
body of pancreas
33
endocrine pancreas
16
subcutaneous adipose tissue
12
omental fat pad
11
pancreas
2
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