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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ChIP-seq
13
ATAC-seq
9
total RNA-seq
DNase-seq
Assay category
35
DNA binding
13
DNA accessibility
9
Transcription
Target of assay
24
histone
24
histone modification
16
broad histone mark
11
control
8
narrow histone mark
Date released
40
October, 2019
8
February, 2021
8
February, 2023
1
February, 2020
Available data
48
bam
33
bed narrowPeak
29
bigWig
24
bigBed narrowPeak
5
tsv
4
bed bed3
4
txt
Organism
57
Homo sapiens
Biosample type
57
tissue
Organ
864
pancreas
784
liver
671
connective tissue
489
adipose tissue
435
epithelium
270
heart
251
brain
219
vasculature
215
blood vessel
209
kidney
159
bone element
135
artery
86
limb
69
blood
69
bodily fluid
62
musculature of body
57
eye
41
nerve
37
embryo
24
spleen
20
vein
16
skeleton
11
lung
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
57
AMP
Genome assembly (visualization)
41
hg19
37
GRCh38
Lab
57
AMP-T2D consortium
assay_title!
DNase-seq
single cell RNA-seq
BIOSAMPLE
ASSAY
57 results
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ChIP-seq
ATAC-seq
total RNA-seq
tissue
tibial nerve
35
1
5
acetabular part of hip bone
1
1
ilium
1
1
ischium
1
1
pubis
1
1
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