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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
Hi-C
3
ATAC-seq
2
ChIP-seq
1
FAIRE-seq
Assay category
4
3D chromatin structure
4
DNA accessibility
2
DNA binding
Target of assay
2
broad histone mark
2
histone
2
histone modification
Date released
55
November, 2017
53
May, 2020
45
February, 2023
40
May, 2021
39
May, 2022
27
August, 2017
21
July, 2019
20
August, 2021
16
March, 2020
10
October, 2019
6
February, 2021
3
January, 2018
3
October, 2022
2
November, 2019
1
April, 2019
1
March, 2019
1
May, 2019
1
November, 2018
Available data
6
bigWig
4
bigBed narrowPeak
4
hic
3
bam
3
bedpe bed3+
2
bed broadPeak
2
bigBed broadPeak
1
bed narrowPeak
1
tar
Organism
10
Homo sapiens
Biosample type
4
in vitro differentiated cells
4
primary cell
2
tissue
Organ
4
blood vessel
4
epithelium
4
vasculature
4
vein
3
connective tissue
1
adipose tissue
1
heart
Project
10
AMP
Genome assembly (visualization)
209
hg19
GRCh38
Lab
10
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
1
audit script error
assay_title!
DNase-seq
assembly!
GRCh38
BIOSAMPLE
ASSAY
10 results
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Hi-C
ATAC-seq
ChIP-seq
FAIRE-seq
in vitro differentiated cells
adipocyte
2
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
primary cell
endothelial cell of umbilical vein
1
2
1
tissue
adipose tissue
1
heart
1
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