Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
75
ChIP-seq
21
ATAC-seq
17
pCHi-C
total RNA-seq
1
DNAme array
Assay category
75
DNA binding
21
DNA accessibility
1
DNA methylation
Target of assay
54
histone
54
histone modification
32
broad histone mark
22
narrow histone mark
12
transcription factor
9
control
5
RNA binding protein
Date released
174
May, 2022
159
August, 2017
155
August, 2021
147
February, 2021
132
May, 2020
126
November, 2017
114
May, 2021
91
October, 2019
77
February, 2023
47
September, 2023
46
March, 2020
40
September, 2020
29
July, 2019
29
October, 2018
24
May, 2019
19
April, 2020
17
December, 2017
16
April, 2019
16
January, 2021
10
November, 2020
9
November, 2018
9
October, 2017
8
February, 2018
8
January, 2018
8
June, 2019
5
December, 2018
5
December, 2019
4
January, 2019
4
March, 2023
4
November, 2019
4
October, 2022
4
September, 2017
3
March, 2019
3
May, 2023
1
August, 2018
1
August, 2022
1
September, 2018
Available data
38
bigWig
30
bed narrowPeak
1
bam
1
tagAlign
Organism
114
Homo sapiens
Biosample type
54
primary cell
43
in vitro differentiated cells
16
cell line
1
tissue
Organ
17
epithelium
17
pancreas
1
bone element
1
bone marrow
1
connective tissue
1
thymus
Project
97
AMP
17
T1D
Genome assembly (visualization)
141
hg19
GRCh38
Lab
92
Kyle Gaulton, UCSD
22
AMP-T2D consortium
Audit category:
17
inconsistent ontology term
assay_title!
DNase-seq
total RNA-seq
assembly!
GRCh38
BIOSAMPLE
ASSAY
114 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
pCHi-C
DNAme array
primary cell
CD8-positive, alpha-beta T cell
33
1
monocyte
1
1
1
naive thymus-derived CD4-positive, alpha-beta T cell
2
1
CD4-positive, alpha-beta T cell
2
neutrophil
1
1
+ See 10 more…
in vitro differentiated cells
embryonic stem cell
37
5
pancreatic PP cell
1
cell line
EndoC_BH1
16
tissue
thymus
1
See all biosamples
Download