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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
ATAC-seq
21
total RNA-seq
16
WGBS
13
ChIP-seq
1
single cell RNA-seq
Assay category
23
DNA accessibility
22
Transcription
16
DNA methylation
13
DNA binding
Target of assay
7
histone
7
histone modification
6
control
4
narrow histone mark
3
broad histone mark
Date released
29
May, 2022
14
August, 2017
14
September, 2018
10
February, 2023
2
August, 2020
2
September, 2017
2
September, 2020
1
April, 2018
Available data
45
fastq
31
bam
29
zippedFastqFolder
28
bigWig
14
bed narrowPeak
11
tsv
7
bigBed narrowPeak
Organism
74
Homo sapiens
Biosample type
74
primary cell
Organ
74
epithelium
74
pancreas
Project
43
HPAP
31
AMP
Genome assembly (visualization)
28
GRCh38
25
hg19
Lab
43
Klaus Kaestner, Upenn
31
AMP-T2D consortium
Audit category:
2
inconsistent control read length
assay_title!
DNase-seq
replication_type!
anisogenic
BIOSAMPLE
ASSAY
74 results
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ATAC-seq
total RNA-seq
WGBS
ChIP-seq
single cell RNA-seq
primary cell
pancreatic beta cell
23
21
16
13
1
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