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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ATAC-seq
Assay category
7
DNA accessibility
Date released
5
February, 2023
2
February, 2021
Available data
2893
bam
2662
bigWig
1469
tsv
1437
bed narrowPeak
1206
fastq
817
bigBed narrowPeak
358
tagAlign
158
txt
153
zippedFastqFolder
116
bed broadPeak
79
bigBed broadPeak
64
xls
44
bed bed3+
36
bed bedMethyl
36
bigBed bedMethyl
19
hic
16
bedpe bed3+
8
csv
7
bed bed3
5
hdf5
4
tar
3
cool
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
7
Homo sapiens
Biosample type
in vitro differentiated cells
5
tissue
1
cell line
1
primary cell
Organ
4
bone element
4
skeleton
1
brain
1
connective tissue
1
liver
Project
7
AMP
Genome assembly (visualization)
7
hg19
2
GRCh38
Lab
7
AMP-T2D consortium
Audit category:
1
inconsistent replicate
assay_title!
DNase-seq
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
7 results
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ATAC-seq
tissue
acetabular part of hip bone
1
brain
1
ilium
1
ischium
1
pubis
1
cell line
HepG2
1
primary cell
osteoblast
1
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