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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
ChIP-seq
DNase-seq
6
total RNA-seq
3
RRBS
Assay category
15
DNA binding
6
Transcription
3
DNA methylation
Target of assay
10
histone
10
histone modification
5
broad histone mark
5
narrow histone mark
3
control
2
RNA binding protein
2
transcription factor
Date released
9
October, 2019
7
July, 2019
5
May, 2019
3
June, 2019
Available data
21
bam
18
bigWig
12
bed narrowPeak
6
bigBed narrowPeak
6
tsv
3
bed bedMethyl
3
bigBed bedMethyl
Organism
24
Homo sapiens
Biosample type
231
tissue
24
primary cell
18
cell line
Organ
388
epithelium
346
pancreas
33
connective tissue
31
vasculature
27
blood vessel
24
kidney
20
vein
16
brain
13
musculature of body
12
liver
10
heart
8
blood
8
bodily fluid
4
eye
2
adipose tissue
2
artery
1
bone element
1
bone marrow
1
pericardium
Project
24
AMP
Genome assembly (visualization)
21
hg19
18
GRCh38
Lab
24
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
assay_title!
DNase-seq
month_released!
November, 2018
BIOSAMPLE
ASSAY
24 results
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ChIP-seq
total RNA-seq
RRBS
primary cell
epithelial cell of proximal tubule
10
1
1
kidney epithelial cell
5
1
1
renal cortical epithelial cell
1
1
glomerular endothelial cell
1
kidney glomerular epithelial cell
1
kidney tubule cell
1
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