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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
ATAC-seq
Assay category
3
DNA accessibility
Date released
February, 2021
3
February, 2023
Available data
2611
bam
2409
bigWig
1585
bed narrowPeak
1301
fastq
1041
tsv
bigBed narrowPeak
390
tagAlign
153
zippedFastqFolder
116
bed broadPeak
79
bigBed broadPeak
72
txt
67
bed bed3+
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
10
bed bed3
5
hdf5
4
tar
3
bed bedgraph
3
cool
2
csv
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
3
Homo sapiens
Biosample type
3
in vitro differentiated cells
Project
3
AMP
Genome assembly (visualization)
3
hg19
Lab
3
Struan F.A. Grant, CHOP
Audit category:
1
inconsistent ontology term
assay_title!
DNase-seq
files.file_type!
bigBed narrowPeak
month_released!
February, 2021
BIOSAMPLE
ASSAY
3 results
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ATAC-seq
in vitro differentiated cells
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
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