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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
DNase-seq
17
ChIP-seq
4
total RNA-seq
2
small RNA-seq
1
WGBS
Assay category
17
DNA binding
6
Transcription
1
DNA methylation
Target of assay
14
histone
14
histone modification
8
broad histone mark
6
narrow histone mark
3
control
Date released
10
June, 2019
7
May, 2019
5
July, 2019
2
March, 2020
Available data
35
bigWig
27
bed narrowPeak
24
bam
15
tagAlign
14
bigBed narrowPeak
13
bed broadPeak
9
tsv
4
bed bedMethyl
4
bigBed bedMethyl
2
bedpe bed3+
2
fastq
2
hic
1
bed bed3+
1
txt
Organism
24
Homo sapiens
Biosample type
12
primary cell
12
tissue
Organ
681
pancreas
676
liver
584
connective tissue
440
adipose tissue
300
epithelium
211
brain
181
heart
174
vasculature
171
blood vessel
98
artery
78
limb
66
bone element
65
kidney
60
blood
60
bodily fluid
40
nerve
36
embryo
24
musculature of body
23
spleen
18
vein
8
skeleton
3
eye
1
pericardium
1
pituitary gland
Project
24
AMP
Genome assembly (visualization)
20
GRCh38
20
hg19
Lab
24
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
assay_title!
DNase-seq
BIOSAMPLE
ASSAY
24 results
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Clear Filters
ChIP-seq
total RNA-seq
small RNA-seq
WGBS
primary cell
skeletal muscle satellite cell
8
1
1
skeletal muscle cell
2
tissue
muscle of leg
7
1
psoas muscle
2
skeletal muscle tissue
1
1
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