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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
DNase-seq
17
ChIP-seq
4
total RNA-seq
2
small RNA-seq
Assay category
17
DNA binding
6
Transcription
Target of assay
14
histone
14
histone modification
8
broad histone mark
6
narrow histone mark
3
control
Date released
10
June, 2019
7
May, 2019
4
July, 2019
2
March, 2020
Available data
35
bigWig
27
bed narrowPeak
24
bam
15
tagAlign
14
bigBed narrowPeak
13
bed broadPeak
9
tsv
bed bedMethyl
4
bigBed bedMethyl
2
bedpe bed3+
2
fastq
2
hic
1
bed bed3+
1
txt
Organism
23
Homo sapiens
Biosample type
12
primary cell
11
tissue
Organ
677
pancreas
675
liver
582
connective tissue
438
adipose tissue
300
epithelium
211
brain
175
heart
173
vasculature
170
blood vessel
98
artery
77
limb
66
bone element
65
kidney
60
blood
60
bodily fluid
40
nerve
36
embryo
23
musculature of body
21
spleen
18
vein
8
skeleton
3
eye
1
pericardium
1
pituitary gland
Project
23
AMP
Genome assembly (visualization)
20
hg19
19
GRCh38
Lab
23
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
assay_title!
DNase-seq
files.file_type!
bed bedMethyl
BIOSAMPLE
ASSAY
23 results
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Clear Filters
ChIP-seq
total RNA-seq
small RNA-seq
primary cell
skeletal muscle satellite cell
8
1
1
skeletal muscle cell
2
tissue
muscle of leg
7
psoas muscle
2
skeletal muscle tissue
1
1
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