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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
ChIP-seq
DNase-seq
8
ATAC-seq
4
Hi-C
4
total RNA-seq
1
WGBS
Assay category
66
DNA binding
8
DNA accessibility
4
3D chromatin structure
4
Transcription
1
DNA methylation
Target of assay
49
histone
49
histone modification
34
broad histone mark
17
control
15
narrow histone mark
Date released
65
October, 2019
7
May, 2019
6
February, 2021
5
July, 2019
February, 2020
Available data
78
bam
56
bed narrowPeak
55
bigWig
48
bigBed narrowPeak
4
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
83
Homo sapiens
Biosample type
83
tissue
Organ
937
pancreas
784
liver
673
connective tissue
505
epithelium
487
adipose tissue
320
heart
273
kidney
242
brain
222
vasculature
218
blood vessel
159
bone element
135
artery
83
limb
69
blood
69
bodily fluid
61
musculature of body
56
eye
40
nerve
37
embryo
24
spleen
20
lung
20
vein
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
83
AMP
Genome assembly (visualization)
60
GRCh38
60
hg19
Lab
83
AMP-T2D consortium
assay_title!
DNase-seq
month_released!
February, 2020
BIOSAMPLE
ASSAY
83 results
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ChIP-seq
ATAC-seq
Hi-C
total RNA-seq
WGBS
tissue
tibial nerve
35
1
4
tibial artery
23
1
muscle of leg
7
1
gastrocnemius medialis
4
distal epiphysis of femur
1
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