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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
WGBS
21
RRBS
Assay category
1706
DNA binding
1676
Transcription
487
DNA accessibility
55
DNA methylation
34
3D chromatin structure
1
DNA sequencing
Date released
May, 2022
27
July, 2019
15
August, 2017
7
November, 2018
6
February, 2021
May, 2021
Available data
36
bed bedMethyl
36
bigBed bedMethyl
21
fastq
18
bam
17
bigWig
6
tsv
Organism
55
Homo sapiens
Biosample type
38
tissue
16
primary cell
1
cell line
Organ
12
epithelium
12
pancreas
10
heart
7
connective tissue
7
liver
6
adipose tissue
6
musculature of body
4
kidney
3
vasculature
2
blood vessel
2
brain
2
spleen
1
eye
1
limb
1
pericardium
Project
49
AMP
6
HPAP
Genome assembly (visualization)
19
hg19
17
GRCh38
Lab
49
AMP-T2D consortium
6
Klaus Kaestner, Upenn
Audit category:
2
inconsistent ontology term
assay_title!
DNase-seq
month_released!
May, 2021
May, 2022
BIOSAMPLE
ASSAY
55 results
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WGBS
RRBS
tissue
heart left ventricle
4
1
liver
3
1
skeletal muscle tissue
4
adipose tissue
3
pancreas
2
1
+ See 13 more…
primary cell
pancreatic alpha cell
6
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
+ See 6 more…
cell line
HepG2
1
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