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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
53
ChIP-seq
3
ATAC-seq
DNase-seq
1
RRBS
Assay category
53
DNA binding
3
DNA accessibility
1
DNA methylation
Target of assay
38
histone
38
histone modification
22
narrow histone mark
16
broad histone mark
13
control
2
RNA binding protein
2
transcription factor
1
chromatin remodeller
Date released
206
May, 2021
147
May, 2020
134
May, 2022
88
February, 2023
73
September, 2018
59
September, 2020
57
August, 2017
48
February, 2021
48
July, 2018
43
April, 2018
31
July, 2019
31
June, 2019
30
October, 2019
9
November, 2017
8
January, 2021
7
August, 2020
5
December, 2019
5
May, 2019
5
November, 2020
5
September, 2017
4
August, 2021
3
August, 2018
3
June, 2018
3
October, 2022
2
October, 2018
1
March, 2020
1
March, 2023
1
November, 2018
Available data
57
fastq
56
bam
44
bigWig
31
bed narrowPeak
17
bigBed narrowPeak
13
bed broadPeak
13
bigBed broadPeak
12
tagAlign
1
bed bedMethyl
1
bigBed bedMethyl
Organism
57
Homo sapiens
Biosample type
282
tissue
67
in vitro differentiated cells
57
primary cell
Organ
41
pancreas
29
epithelium
Project
57
AMP
Genome assembly (visualization)
45
hg19
42
GRCh38
Lab
57
AMP-T2D consortium
Audit category:
12
missing controlled_by
Audit category:
5
inconsistent control read length
2
inconsistent assembly
1
inconsistent control run_type
assay_title!
DNase-seq
BIOSAMPLE
ASSAY
57 results
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Clear Filters
ChIP-seq
ATAC-seq
RRBS
primary cell
skeletal muscle myoblast
15
1
pancreatic alpha cell
13
1
pancreatic beta cell
13
1
pancreatic endocrine cell
12
pancreatic acinar cell
1
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