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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
76
ChIP-seq
26
ATAC-seq
20
total RNA-seq
2
Hi-C
Assay category
76
DNA binding
26
DNA accessibility
20
Transcription
2
3D chromatin structure
Target of assay
70
histone
70
histone modification
43
broad histone mark
27
narrow histone mark
6
transcription factor
4
RNA binding protein
Date released
574
February, 2021
316
May, 2021
281
November, 2017
272
August, 2017
260
May, 2020
209
October, 2019
164
July, 2018
97
May, 2019
91
July, 2019
77
December, 2017
72
September, 2018
65
April, 2019
62
November, 2018
60
August, 2021
59
November, 2019
49
April, 2018
47
October, 2018
45
February, 2023
39
May, 2022
32
March, 2020
31
February, 2018
30
December, 2018
26
January, 2019
23
June, 2019
13
October, 2017
7
September, 2017
5
December, 2019
5
November, 2020
3
August, 2018
3
January, 2018
3
June, 2018
3
March, 2019
3
October, 2022
1
May, 2023
Available data
121
bam
102
bed narrowPeak
96
bigWig
64
bigBed narrowPeak
20
tsv
2
bedpe bed3+
2
hic
Organism
124
Homo sapiens
Biosample type
105
tissue
14
cell line
5
in vitro differentiated cells
Organ
53
pancreas
47
heart
18
kidney
14
epithelium
1
adipose tissue
1
connective tissue
Project
124
AMP
Genome assembly (visualization)
124
hg19
121
GRCh38
Lab
124
AMP-T2D consortium
Audit category:
20
inconsistent ontology term
assay_title!
DNase-seq
BIOSAMPLE
ASSAY
124 results
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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
Hi-C
tissue
islet of Langerhans
19
19
1
heart left ventricle
29
kidney
18
heart right ventricle
11
heart
7
+ See 1 more…
cell line
EndoC_BH1
11
1
1
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
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