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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
64
ChIP-seq
14
total RNA-seq
13
ATAC-seq
4
pCHi-C
DNase-seq
Assay category
64
DNA binding
14
Transcription
13
DNA accessibility
Target of assay
39
control
25
histone
25
histone modification
22
narrow histone mark
3
broad histone mark
Date released
259
August, 2021
161
May, 2022
160
February, 2023
141
February, 2021
134
August, 2017
125
November, 2017
95
October, 2019
83
May, 2021
81
May, 2020
59
September, 2020
47
September, 2023
32
March, 2020
29
October, 2018
25
February, 2020
23
May, 2019
19
April, 2020
17
December, 2017
17
July, 2019
17
November, 2018
16
January, 2021
15
April, 2019
14
May, 2023
10
November, 2020
10
October, 2017
8
February, 2018
8
June, 2019
7
August, 2020
5
December, 2018
5
December, 2019
5
January, 2018
5
March, 2023
4
January, 2019
4
July, 2018
4
September, 2017
2
March, 2019
2
November, 2019
1
August, 2018
1
August, 2022
1
October, 2022
1
September, 2018
Available data
43
bam
9
tagAlign
Organism
95
Homo sapiens
Biosample type
79
tissue
10
cell line
6
primary cell
Organ
21
eye
17
limb
11
nerve
10
blood vessel
10
pancreas
10
vasculature
8
brain
6
epithelium
6
kidney
5
artery
5
vein
4
gonad
4
ovary
1
connective tissue
1
lymph node
1
pituitary gland
1
skin of body
Project
95
AMP
Genome assembly (visualization)
hg19
199
GRCh38
Lab
95
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
assay_title!
DNase-seq
assembly!
hg19
BIOSAMPLE
ASSAY
95 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
pCHi-C
tissue
islet of Langerhans
21
14
13
4
tibial nerve
11
tibial artery
5
kidney
2
central medial thalamic nucleus
1
+ See 8 more…
cell line
Panc1
7
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
primary cell
endothelial cell of umbilical vein
5
epithelial cell of proximal tubule
1
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