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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
DNase-seq
63
ChIP-seq
26
total RNA-seq
14
ATAC-seq
1
single cell RNA-seq
Assay category
63
DNA binding
27
Transcription
14
DNA accessibility
Target of assay
51
histone
51
histone modification
26
narrow histone mark
25
broad histone mark
8
control
4
RNA binding protein
4
transcription factor
Date released
715
February, 2021
406
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
304
October, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
80
April, 2019
79
November, 2018
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
31
June, 2019
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
15
November, 2020
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
103
bam
95
bigWig
73
fastq
69
bed narrowPeak
37
bigBed narrowPeak
26
tsv
1
csv
Organism
104
Homo sapiens
Biosample type
104
primary cell
Organ
72
pancreas
67
epithelium
12
connective tissue
10
musculature of body
5
heart
3
eye
3
kidney
Project
104
AMP
Genome assembly (visualization)
95
GRCh38
95
hg19
Lab
104
AMP-T2D consortium
Audit category:
22
inconsistent ontology term
Audit category:
32
missing controlled_by
assay_title!
DNase-seq
BIOSAMPLE
ASSAY
104 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
single cell RNA-seq
primary cell
pancreatic ductal cell
13
4
4
pancreatic beta cell
10
4
pancreatic acinar cell
8
2
3
pancreatic alpha cell
10
3
pancreatic endocrine cell
11
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