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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ATAC-seq
Assay category
7
DNA accessibility
Date released
4
February, 2021
3
February, 2023
Available data
3183
bam
2920
bigWig
1599
tsv
1568
bed narrowPeak
1346
fastq
833
bigBed narrowPeak
398
tagAlign
161
txt
153
zippedFastqFolder
116
bed broadPeak
79
bigBed broadPeak
69
bed bed3+
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
7
Homo sapiens
Biosample type
7
in vitro differentiated cells
Organ
4
connective tissue
Project
7
AMP
Genome assembly (visualization)
7
hg19
Lab
4
AMP-T2D consortium
3
Struan F.A. Grant, CHOP
Audit category:
1
inconsistent ontology term
assay_title!
DNase-seq
organ_slims!
thymus
BIOSAMPLE
ASSAY
7 results
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Clear Filters
ATAC-seq
in vitro differentiated cells
adipocyte
4
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
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