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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
94
ChIP-seq
DNase-seq
1
FAIRE-seq
Assay category
94
DNA binding
1
DNA accessibility
Target of assay
91
histone
91
histone modification
58
broad histone mark
33
narrow histone mark
3
RNA binding protein
3
transcription factor
Date released
63
November, 2017
25
May, 2019
6
October, 2017
1
July, 2019
Available data
211
bam
190
bigWig
171
bed narrowPeak
118
tagAlign
95
bigBed narrowPeak
26
tsv
19
fastq
15
bed broadPeak
6
bigBed broadPeak
3
bed bed3+
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3
1
tagAlign bed3+
Organism
95
Homo sapiens
Biosample type
89
tissue
6
primary cell
Organ
353
liver
95
brain
83
pancreas
72
vasculature
70
blood vessel
64
heart
59
epithelium
54
blood
54
bodily fluid
48
limb
25
kidney
24
nerve
21
artery
19
connective tissue
14
musculature of body
12
spleen
11
vein
8
adipose tissue
2
eye
Project
95
AMP
Genome assembly (visualization)
94
GRCh38
43
hg19
Lab
95
AMP-T2D consortium
Audit category:
3
missing controlled_by
assay_title!
DNase-seq
BIOSAMPLE
ASSAY
95 results
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ChIP-seq
FAIRE-seq
tissue
layer of hippocampus
16
temporal lobe
13
angular gyrus
12
caudate nucleus
12
middle frontal area 46
11
+ See 5 more…
primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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