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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
2
WGBS
2
pCHi-C
1
ATAC-seq
DNase-seq
Assay category
20
DNA binding
2
DNA methylation
1
DNA accessibility
Target of assay
8
control
6
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
8
November, 2018
7
December, 2018
7
January, 2019
2
March, 2020
1
October, 2017
Available data
23
bam
23
fastq
15
bigWig
13
bed narrowPeak
12
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
2
tsv
Organism
25
Homo sapiens
Biosample type
24
tissue
1
cell line
Organ
938
pancreas
785
liver
675
connective tissue
505
epithelium
489
adipose tissue
363
heart
273
kidney
254
brain
225
vasculature
221
blood vessel
159
bone element
137
artery
86
limb
blood
69
bodily fluid
63
musculature of body
57
eye
41
nerve
37
embryo
24
spleen
20
lung
20
vein
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
25
AMP
Genome assembly (visualization)
15
GRCh38
13
hg19
Lab
25
AMP-T2D consortium
assay_title!
DNase-seq
organ_slims!
blood
BIOSAMPLE
ASSAY
25 results
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ChIP-seq
WGBS
pCHi-C
ATAC-seq
tissue
spleen
20
2
1
1
cell line
MCF-7
1
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