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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ChIP-seq
2
WGBS
1
ATAC-seq
DNase-seq
1
pCHi-C
Assay category
13
DNA binding
2
DNA methylation
1
DNA accessibility
Target of assay
6
histone
6
histone modification
4
broad histone mark
4
control
3
other context
3
other post-translational modification
3
transcription factor
2
narrow histone mark
Date released
8
November, 2018
December, 2018
7
January, 2019
1
March, 2020
1
October, 2017
Available data
16
bam
16
fastq
12
bigWig
10
bed narrowPeak
9
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
tsv
Organism
17
Homo sapiens
Biosample type
17
tissue
Organ
938
pancreas
784
liver
675
connective tissue
505
epithelium
489
adipose tissue
363
heart
273
kidney
254
brain
225
vasculature
221
blood vessel
159
bone element
137
artery
86
limb
63
musculature of body
57
eye
42
blood
42
bodily fluid
41
nerve
37
embryo
20
lung
20
vein
17
spleen
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
17
AMP
Genome assembly (visualization)
12
GRCh38
10
hg19
Lab
17
AMP-T2D consortium
assay_title!
DNase-seq
organ_slims!
mammary gland
month_released!
December, 2018
BIOSAMPLE
ASSAY
17 results
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ChIP-seq
WGBS
ATAC-seq
pCHi-C
tissue
spleen
13
2
1
1
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