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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
ChIP-seq
2
WGBS
1
ATAC-seq
DNase-seq
1
pCHi-C
Assay category
16
DNA binding
2
DNA methylation
1
DNA accessibility
Target of assay
8
control
6
histone
6
histone modification
6
transcription factor
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
8
November, 2018
7
December, 2018
3
January, 2019
1
March, 2020
1
October, 2017
Available data
19
bam
19
fastq
11
bigWig
9
bed narrowPeak
8
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
tsv
Organism
20
Homo sapiens
Biosample type
20
tissue
Organ
860
pancreas
743
liver
631
connective tissue
469
adipose tissue
461
epithelium
286
heart
258
kidney
184
brain
180
vasculature
176
blood vessel
159
bone element
123
artery
69
blood
69
bodily fluid
57
eye
52
limb
43
musculature of body
33
embryo
25
nerve
20
lung
20
spleen
16
skeleton
11
vein
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
20
AMP
Genome assembly (visualization)
11
GRCh38
9
hg19
Lab
20
AMP-T2D consortium
assay_title!
DNase-seq
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
20 results
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ChIP-seq
WGBS
ATAC-seq
pCHi-C
tissue
spleen
16
2
1
1
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