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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
19
total RNA-seq
DNase-seq
4
pCHi-C
2
ChIP-seq
1
RRBS
Assay category
28
DNA accessibility
19
Transcription
2
DNA binding
1
DNA methylation
Target of assay
3
histone
histone modification
3
narrow histone mark
1
RNA binding protein
1
control
1
transcription factor
Date released
31
February, 2023
19
October, 2019
2
June, 2019
1
February, 2020
1
July, 2019
Available data
28
bed narrowPeak
5
tsv
2
bam
1
bed bedMethyl
1
bigBed bedMethyl
1
bigBed narrowPeak
1
bigWig
Organism
54
Homo sapiens
Biosample type
51
tissue
3
primary cell
Organ
787
pancreas
682
liver
597
connective tissue
457
adipose tissue
412
epithelium
261
heart
243
kidney
159
bone element
154
vasculature
151
blood vessel
117
artery
68
blood
68
bodily fluid
67
brain
54
eye
37
limb
30
musculature of body
25
embryo
20
lung
18
spleen
17
nerve
16
skeleton
5
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
54
AMP
Genome assembly (visualization)
29
hg19
1
GRCh38
Lab
54
AMP-T2D consortium
assay_title!
DNase-seq
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
54 results
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Clear Filters
ATAC-seq
total RNA-seq
pCHi-C
ChIP-seq
RRBS
tissue
islet of Langerhans
1
14
4
retina
15
3
pigmented layer of retina
12
2
primary cell
retinal pigment epithelial cell
2
1
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