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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
ChIP-seq
DNase-seq
1
RRBS
1
small RNA-seq
1
total RNA-seq
Assay category
10
DNA binding
2
Transcription
1
DNA methylation
Target of assay
8
histone
8
histone modification
4
broad histone mark
4
narrow histone mark
2
control
Date released
10
June, 2019
3
July, 2019
Available data
12
bam
10
bigWig
8
bed narrowPeak
8
bigBed narrowPeak
2
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
13
Homo sapiens
Biosample type
tissue
13
primary cell
Organ
487
epithelium
437
pancreas
428
liver
130
connective tissue
97
vasculature
93
blood vessel
77
heart
69
blood
69
bodily fluid
68
artery
42
kidney
37
embryo
20
vein
16
brain
13
musculature of body
4
eye
3
adipose tissue
1
bone element
1
bone marrow
1
mammary gland
1
pericardium
Project
13
AMP
Genome assembly (visualization)
11
hg19
10
GRCh38
Lab
13
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
assay_title!
DNase-seq
target.investigated_as!
nucleotide modification
biosample_type!
tissue
BIOSAMPLE
ASSAY
13 results
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ChIP-seq
RRBS
small RNA-seq
total RNA-seq
primary cell
skeletal muscle satellite cell
8
1
1
skeletal muscle cell
2
1
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