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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
total RNA-seq
85
single cell RNA-seq
47
WGBS
39
ATAC-seq
21
snATAC-seq
Assay category
177
Transcription
60
DNA accessibility
47
DNA methylation
Date released
134
May, 2022
76
February, 2023
56
September, 2020
18
February, 2021
Available data
153
zippedFastqFolder
132
fastq
6
tsv
Organism
284
Homo sapiens
Biosample type
284
primary cell
Organ
139
epithelium
139
pancreas
Project
284
HPAP
Genome assembly (visualization)
GRCh38
Lab
1077
AMP-T2D consortium
284
Klaus Kaestner, Upenn
163
Kyle Gaulton, UCSD
67
Katalin Susztak, Upenn
47
KPMP
40
Karen Mohlke, UNC
37
Bing Ren, UCSD
19
Xin Sun, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
7
Struan F.A. Grant, CHOP
4
Anna Gloyn, Oxford
1
Maike Sander, UCSD
1
Mark McCarthy, Oxford
Audit category:
audit script error
assay_title!
FAIRE-seq
assembly!
GRCh38
audit.ERROR.category!
audit script error
BIOSAMPLE
ASSAY
284 results
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total RNA-seq
single cell RNA-seq
WGBS
ATAC-seq
snATAC-seq
primary cell
Langerhans cell
85
21
pancreatic alpha cell
42
31
22
pancreatic beta cell
11
16
13
exocrine cell
39
pancreatic acinar cell
4
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