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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
69
ChIP-seq
38
ATAC-seq
9
DNase-seq
FAIRE-seq
Assay category
69
DNA binding
47
DNA accessibility
Target of assay
65
histone
65
histone modification
41
broad histone mark
24
narrow histone mark
4
RNA binding protein
4
transcription factor
Date released
39
May, 2019
35
February, 2023
33
October, 2019
5
June, 2019
2
July, 2019
2
November, 2017
Available data
116
bed narrowPeak
113
bam
93
bigWig
78
bigBed narrowPeak
16
tsv
13
bed broadPeak
13
bigBed broadPeak
11
bed bed3+
3
fastq
3
hic
2
bedpe bed3+
2
hdf5
1
bed bedMethyl
1
bigBed bedMethyl
Organism
116
Homo sapiens
Biosample type
100
tissue
16
primary cell
cell line
Organ
202
brain
191
pancreas
179
heart
174
kidney
135
epithelium
133
liver
120
vasculature
116
blood vessel
92
limb
75
connective tissue
62
artery
60
musculature of body
33
eye
27
nerve
18
ureter
14
embryo
14
spleen
13
adipose tissue
12
vein
8
bone element
8
skeleton
1
pituitary gland
Project
116
AMP
Genome assembly (visualization)
116
GRCh38
80
hg19
Lab
116
AMP-T2D consortium
assay_title!
FAIRE-seq
biosample_type!
cell line
BIOSAMPLE
ASSAY
116 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
tissue
coronary artery
3
36
2
tibial artery
18
1
2
ascending aorta
13
1
thoracic aorta
12
1
aorta
11
primary cell
endothelial cell of umbilical vein
10
2
brain microvascular endothelial cell
2
1
kidney capillary endothelial cell
1
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