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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
102
ChIP-seq
Assay category
102
DNA binding
Target of assay
102
histone
102
histone modification
54
narrow histone mark
53
control
48
broad histone mark
9
transcription factor
5
nucleotide modification
3
RNA binding protein
Date released
54
August, 2017
32
September, 2018
10
November, 2019
3
March, 2020
2
May, 2021
1
October, 2019
Available data
142
bigWig
137
bam
127
bed narrowPeak
100
fastq
bigBed narrowPeak
15
tagAlign
12
bed bed3+
12
bed broadPeak
Organism
102
Homo sapiens
Biosample type
58
primary cell
30
tissue
13
cell line
1
in vitro differentiated cells
Organ
102
pancreas
96
brain
69
connective tissue
67
liver
64
epithelium
41
heart
31
adipose tissue
19
musculature of body
12
embryo
8
kidney
5
blood vessel
5
vasculature
5
vein
4
gonad
4
ovary
2
eye
1
limb
1
lymph node
1
pituitary gland
Project
98
AMP
4
T1D
Genome assembly (visualization)
93
hg19
87
GRCh38
Lab
102
AMP-T2D consortium
Audit category:
12
inconsistent ontology term
Audit category:
48
missing controlled_by
Audit category:
4
inconsistent control read length
assay_title!
FAIRE-seq
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
102 results
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Clear Filters
ChIP-seq
primary cell
pancreatic endocrine cell
23
pancreatic ductal cell
13
pancreatic acinar cell
8
pancreatic alpha cell
7
pancreatic beta cell
7
tissue
islet of Langerhans
30
cell line
EndoC_BH1
12
Panc1
1
in vitro differentiated cells
pancreatic PP cell
1
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