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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
ATAC-seq
Assay category
16
DNA accessibility
Date released
13
May, 2021
2
October, 2019
1
November, 2020
Available data
bigWig
608
bam
409
fastq
294
bed narrowPeak
270
tsv
153
zippedFastqFolder
108
bigBed narrowPeak
100
tagAlign
49
bed broadPeak
49
bigBed broadPeak
37
bed bed3+
10
bed bedMethyl
10
bigBed bedMethyl
6
hic
4
bedpe bed3+
4
hdf5
3
cool
2
csv
1
bed bed3
Organism
16
Homo sapiens
Biosample type
174
tissue
17
in vitro differentiated cells
16
primary cell
10
cell line
Organ
1
connective tissue
1
epithelium
1
liver
Project
16
AMP
Genome assembly (visualization)
16
GRCh38
16
hg19
Lab
16
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_title!
FAIRE-seq
files.file_type!
bigWig
BIOSAMPLE
ASSAY
16 results
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ATAC-seq
primary cell
monocyte
13
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
osteoblast
1
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