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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
53
ChIP-seq
8
snATAC-seq
1
ATAC-seq
Assay category
53
DNA binding
9
DNA accessibility
Target of assay
50
transcription factor
10
RNA binding protein
9
chromatin remodeller
control
1
histone
1
histone modification
1
narrow histone mark
Date released
26
December, 2018
15
January, 2019
12
November, 2018
8
January, 2021
1
January, 2018
Available data
54
bigWig
53
bam
53
bed narrowPeak
53
bigBed narrowPeak
53
fastq
Organism
62
Homo sapiens
Biosample type
54
cell line
8
primary cell
Organ
891
pancreas
656
liver
649
connective tissue
493
epithelium
467
adipose tissue
373
heart
341
kidney
254
brain
213
vasculature
208
blood vessel
159
bone element
132
artery
105
limb
90
musculature of body
62
blood
62
bodily fluid
60
eye
32
nerve
30
embryo
20
lung
19
vein
18
ureter
17
spleen
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
54
AMP
8
T1D
Genome assembly (visualization)
54
hg19
53
GRCh38
Lab
54
AMP-T2D consortium
8
Kyle Gaulton, UCSD
Audit category:
inconsistent control
assay_title!
FAIRE-seq
audit.ERROR.category!
inconsistent control
target.investigated_as!
control
BIOSAMPLE
ASSAY
62 results
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Clear Filters
ChIP-seq
snATAC-seq
ATAC-seq
cell line
GM12878
53
1
primary cell
peripheral blood mononuclear cell
8
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