Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ATAC-seq
36
DNase-seq
Assay category
686
DNA binding
359
Transcription
106
DNA accessibility
17
DNA methylation
7
3D chromatin structure
1
DNA sequencing
Date released
35
February, 2023
32
June, 2019
20
May, 2022
9
February, 2021
4
July, 2019
3
November, 2018
2
August, 2017
1
October, 2019
Available data
105
bed narrowPeak
60
bigWig
50
bam
36
bigBed narrowPeak
35
bed bed3+
35
bed broadPeak
35
bigBed broadPeak
4
fastq
1
bed bed3
Organism
106
Homo sapiens
Biosample type
91
tissue
9
cell line
6
primary cell
Organ
171
pancreas
162
kidney
122
epithelium
77
heart
57
vasculature
55
blood vessel
49
artery
44
limb
36
brain
35
musculature of body
34
connective tissue
32
eye
29
liver
18
ureter
12
bone element
12
skeleton
10
lung
9
blood
9
bodily fluid
8
adipose tissue
3
nerve
2
spleen
2
vein
1
pituitary gland
1
skin of body
Project
106
AMP
Genome assembly (visualization)
85
GRCh38
67
hg19
Lab
86
AMP-T2D consortium
20
Karen Mohlke, UNC
Audit category:
2
inconsistent ontology term
1
inconsistent replicate
assay_title!
FAIRE-seq
BIOSAMPLE
ASSAY
106 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
DNase-seq
tissue
coronary artery
36
2
liver
20
2
heart
18
heart left ventricle
2
3
right atrium auricular region
1
2
+ See 3 more…
cell line
smooth muscle cell of the coronary artery
8
HepG2
1
primary cell
cardiac fibroblast
3
Liver fetal (hepatocyte)
1
hepatic stellate cell
1
hepatocyte
1
See all biosamples
Download