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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
74
ChIP-seq
3
MeRIP-seq
Assay category
74
DNA binding
Target of assay
310
transcription factor
89
recombinant protein
77
control
55
RNA binding protein
37
histone
37
histone modification
20
chromatin remodeller
19
broad histone mark
18
narrow histone mark
3
nucleotide modification
2
other context
2
other post-translational modification
Date released
56
November, 2017
9
October, 2019
4
August, 2021
3
February, 2021
3
November, 2020
2
November, 2019
Available data
70
bam
56
fastq
13
bigWig
4
tagAlign
Organism
77
Homo sapiens
Biosample type
187
tissue
77
cell line
37
in vitro differentiated cells
35
primary cell
1
stem cell
Organ
60
liver
11
pancreas
6
blood
bodily fluid
5
epithelium
3
kidney
2
artery
2
blood vessel
2
heart
2
vasculature
Project
77
AMP
Genome assembly (visualization)
13
hg19
Lab
70
AMP-T2D consortium
4
Bing Ren, UCSD
3
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
8
inconsistent ontology term
assay_title!
FAIRE-seq
organ_slims!
bodily fluid
BIOSAMPLE
ASSAY
77 results
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ChIP-seq
MeRIP-seq
cell line
HepG2
60
Panc1
6
EndoC_BH1
2
3
smooth muscle cell of the coronary artery
2
RCC 7860 HIF1a re-expression
1
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