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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
134
ChIP-seq
Assay category
134
DNA binding
Target of assay
281
histone
281
histone modification
147
broad histone mark
134
narrow histone mark
59
control
9
transcription factor
Date released
41
May, 2021
October, 2019
29
August, 2017
27
May, 2020
26
November, 2017
9
August, 2021
2
October, 2017
Available data
323
bigWig
312
bed narrowPeak
287
bam
134
tagAlign
129
bigBed narrowPeak
110
fastq
29
bed broadPeak
14
bigBed broadPeak
13
bed bed3+
Organism
132
Homo sapiens
Biosample type
70
tissue
47
primary cell
12
in vitro differentiated cells
5
cell line
Organ
40
liver
23
brain
7
connective tissue
7
pancreas
5
musculature of body
3
adipose tissue
3
epithelium
Project
94
AMP
40
T1D
Genome assembly (visualization)
102
hg19
95
GRCh38
Lab
94
AMP-T2D consortium
40
Kyle Gaulton, UCSD
Audit category:
1
missing controlled_by
Audit category:
5
inconsistent control read length
assay_title!
GRO-seq
month_released!
October, 2019
BIOSAMPLE
ASSAY
134 results
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ChIP-seq
tissue
liver
33
caudate nucleus
5
cingulate gyrus
5
skeletal muscle tissue
5
substantia nigra
5
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primary cell
monocyte
40
skeletal muscle myoblast
5
hepatocyte
2
in vitro differentiated cells
neural progenitor cell
7
adipocyte
4
pancreatic PP cell
1
cell line
HepG2
5
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