Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
total RNA-seq
single cell RNA-seq
49
ATAC-seq
48
snATAC-seq
47
WGBS
3
Hi-C
Assay category
97
DNA accessibility
92
Transcription
47
DNA methylation
3
3D chromatin structure
Date released
101
May, 2022
76
February, 2023
33
February, 2021
19
September, 2020
7
August, 2020
3
October, 2022
Available data
135
fastq
101
zippedFastqFolder
10
bigWig
6
tsv
3
bedpe bed3+
3
cool
3
hic
Organism
239
Homo sapiens
Biosample type
239
primary cell
Organ
152
epithelium
152
pancreas
Project
4058
AMP
244
T1D
239
HPAP
10
LungMap
4
community
1
ITG
Genome assembly (visualization)
10
GRCh38
3
hg19
Lab
239
Klaus Kaestner, Upenn
Audit category:
30
audit script error
assay_title!
GRO-seq
single cell RNA-seq
organ_slims!
stomach
BIOSAMPLE
ASSAY
239 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ATAC-seq
snATAC-seq
WGBS
Hi-C
primary cell
pancreatic alpha cell
42
29
31
1
Langerhans cell
48
pancreatic beta cell
11
16
16
1
exocrine cell
39
pancreatic acinar cell
4
1
Download