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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
total RNA-seq
18
small RNA-seq
15
RRBS
12
WGBS
Hi-C
6
ATAC-seq
3
single cell RNA-seq
2
FAIRE-seq
Assay category
27
DNA methylation
21
Transcription
8
DNA accessibility
Target of assay
3
control
Date released
406
November, 2017
322
August, 2017
279
October, 2019
242
August, 2021
218
June, 2019
217
May, 2021
174
May, 2022
170
February, 2021
151
May, 2020
120
May, 2019
112
February, 2023
94
December, 2017
88
November, 2018
80
April, 2019
74
October, 2018
56
July, 2019
48
July, 2018
47
September, 2018
47
September, 2023
43
April, 2018
43
September, 2020
39
March, 2020
39
November, 2019
34
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
19
April, 2020
16
January, 2021
14
May, 2023
12
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
5
December, 2019
4
August, 2018
4
March, 2019
4
March, 2023
3
June, 2018
1
August, 2022
1
October, 2022
Available data
38
bam
37
bigWig
23
bed bedMethyl
23
bigBed bedMethyl
21
tsv
7
bed narrowPeak
2
bigBed narrowPeak
Organism
56
Homo sapiens
Biosample type
42
tissue
14
primary cell
Organ
15
heart
11
brain
6
epithelium
6
kidney
5
liver
5
vasculature
4
blood vessel
4
connective tissue
4
musculature of body
4
pancreas
3
adipose tissue
1
artery
1
eye
1
limb
1
pericardium
Project
56
AMP
Genome assembly (visualization)
43
hg19
35
GRCh38
Lab
56
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_title!
Hi-C
total RNA-seq
BIOSAMPLE
ASSAY
56 results
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Clear Filters
small RNA-seq
RRBS
WGBS
ATAC-seq
single cell RNA-seq
FAIRE-seq
tissue
heart left ventricle
1
4
2
right lobe of liver
2
1
aorta
2
body of pancreas
2
frontal cortex
1
1
+ See 23 more…
primary cell
cerebellar granule cell
2
Purkinje cell
1
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
+ See 8 more…
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