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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
Hi-C
3
pCHi-C
1
FAIRE-seq
Assay category
1
DNA accessibility
Date released
2
March, 2020
1
August, 2018
1
October, 2019
Available data
2810
bam
2643
bigWig
1481
tsv
1413
bed narrowPeak
931
fastq
687
bigBed narrowPeak
378
tagAlign
266
bed bed3+
263
bed broadPeak
226
bigBed broadPeak
160
txt
153
zippedFastqFolder
64
xls
35
bed bedMethyl
35
bigBed bedMethyl
11
bed bed3
8
csv
7
bed bedgraph
3
bedpe bed3+
2
ibed
1
tagAlign bed3+
1
tar
Organism
4
Homo sapiens
Biosample type
cell line
3
in vitro differentiated cells
1
primary cell
Organ
1
adipose tissue
1
blood vessel
1
connective tissue
1
epithelium
1
vasculature
1
vein
Project
4
AMP
Genome assembly (visualization)
3
hg19
Lab
4
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_title!
Hi-C
biosample_type!
cell line
BIOSAMPLE
ASSAY
4 results
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pCHi-C
FAIRE-seq
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
white fat cell
1
primary cell
endothelial cell of umbilical vein
1
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