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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
ChIP-seq
41
total RNA-seq
14
ATAC-seq
1
single cell RNA-seq
Assay category
56
DNA binding
42
Transcription
14
DNA accessibility
Target of assay
48
histone
48
histone modification
25
broad histone mark
23
narrow histone mark
8
control
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
316
August, 2021
309
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
100
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
November, 2019
59
September, 2020
54
March, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
34
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
4
August, 2018
4
March, 2019
4
March, 2023
3
June, 2018
1
August, 2022
1
October, 2022
Available data
112
fastq
111
bam
103
bigWig
62
bed narrowPeak
41
tsv
14
bigBed narrowPeak
1
csv
Organism
112
Homo sapiens
Biosample type
73
primary cell
39
in vitro differentiated cells
Organ
72
pancreas
61
epithelium
13
embryo
Project
112
AMP
Genome assembly (visualization)
103
GRCh38
103
hg19
Lab
112
AMP-T2D consortium
Audit category:
32
missing controlled_by
Audit category:
2
inconsistent control read length
assay_title!
Hi-C
month_released!
November, 2019
BIOSAMPLE
ASSAY
112 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
single cell RNA-seq
primary cell
pancreatic ductal cell
13
4
4
pancreatic beta cell
10
4
pancreatic acinar cell
8
2
3
pancreatic alpha cell
10
3
pancreatic endocrine cell
11
+ See 1 more…
in vitro differentiated cells
pancreatic endoderm
9
4
definitive endodermal cell
3
2
embryonic stem cell
3
2
endocrine cell
3
2
posterior foregut
3
2
+ See 2 more…
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