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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
44
total RNA-seq
18
small RNA-seq
Hi-C
6
ATAC-seq
4
WGBS
3
single cell RNA-seq
2
FAIRE-seq
Assay category
65
Transcription
8
DNA accessibility
4
DNA methylation
Target of assay
3
control
Date released
715
February, 2021
406
November, 2017
405
August, 2017
399
May, 2021
341
May, 2020
316
August, 2021
309
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
94
December, 2017
81
November, 2018
80
April, 2019
77
July, 2019
76
October, 2018
73
September, 2018
59
November, 2019
59
September, 2020
54
March, 2020
49
April, 2018
47
September, 2023
39
February, 2018
34
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
4
August, 2018
4
March, 2019
4
March, 2023
3
June, 2018
1
August, 2022
1
October, 2022
Available data
82
bam
81
bigWig
65
tsv
23
bed bedMethyl
bigBed bedMethyl
7
bed narrowPeak
2
bigBed narrowPeak
Organism
77
Homo sapiens
Biosample type
59
tissue
18
primary cell
Organ
17
heart
16
connective tissue
13
brain
12
adipose tissue
8
blood vessel
8
liver
8
vasculature
7
kidney
5
epithelium
4
musculature of body
4
pancreas
3
artery
1
pericardium
Project
77
AMP
Genome assembly (visualization)
72
hg19
71
GRCh38
Lab
77
AMP-T2D consortium
assay_title!
Hi-C
files.file_type!
bigBed bedMethyl
BIOSAMPLE
ASSAY
77 results
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total RNA-seq
small RNA-seq
ATAC-seq
WGBS
single cell RNA-seq
FAIRE-seq
tissue
heart left ventricle
2
2
2
omental fat pad
4
1
right lobe of liver
2
2
1
subcutaneous adipose tissue
4
1
body of pancreas
2
2
+ See 18 more…
primary cell
cerebellar granule cell
2
mesenchymal stem cell of adipose
1
1
skeletal muscle satellite cell
1
1
Purkinje cell
1
cardiac atrium fibroblast
1
+ See 10 more…
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