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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
39
total RNA-seq
17
small RNA-seq
12
WGBS
11
RRBS
Hi-C
6
ATAC-seq
3
single cell RNA-seq
1
FAIRE-seq
Assay category
59
Transcription
23
DNA methylation
7
DNA accessibility
Target of assay
3
control
Date released
707
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
279
October, 2019
205
February, 2023
200
May, 2022
187
August, 2021
168
July, 2018
137
June, 2019
115
May, 2019
December, 2017
89
July, 2019
88
November, 2018
76
October, 2018
73
September, 2018
59
November, 2019
59
September, 2020
57
April, 2019
52
March, 2020
49
April, 2018
40
May, 2024
39
February, 2018
34
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
7
December, 2019
4
August, 2018
4
March, 2019
4
March, 2023
3
June, 2018
1
August, 2022
1
May, 2023
1
October, 2022
Available data
75
bam
74
bigWig
59
tsv
19
bed bedMethyl
19
bigBed bedMethyl
6
bed narrowPeak
1
bigBed narrowPeak
Organism
89
Homo sapiens
Biosample type
69
tissue
20
primary cell
Organ
25
heart
17
connective tissue
15
brain
12
adipose tissue
11
epithelium
kidney
10
vasculature
9
blood vessel
9
liver
6
musculature of body
6
pancreas
3
artery
2
pericardium
1
eye
1
limb
Project
89
AMP
Genome assembly (visualization)
76
hg19
73
GRCh38
Lab
89
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
Hi-C
month_released!
December, 2017
organ_slims!
kidney
BIOSAMPLE
ASSAY
89 results
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total RNA-seq
small RNA-seq
WGBS
RRBS
ATAC-seq
single cell RNA-seq
FAIRE-seq
tissue
heart left ventricle
2
4
1
2
omental fat pad
4
1
right lobe of liver
2
2
1
subcutaneous adipose tissue
4
1
body of pancreas
2
2
+ See 23 more…
primary cell
cerebellar granule cell
2
mesenchymal stem cell of adipose
1
1
skeletal muscle satellite cell
1
1
Purkinje cell
1
cardiac atrium fibroblast
1
+ See 12 more…
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