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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
ChIP-seq
8
ATAC-seq
5
total RNA-seq
Assay category
27
DNA binding
8
DNA accessibility
5
Transcription
Target of assay
14
transcription factor
13
histone
13
histone modification
9
broad histone mark
6
RNA binding protein
6
chromatin remodeller
4
narrow histone mark
Date released
568
February, 2021
280
November, 2017
276
May, 2021
249
August, 2017
210
June, 2019
207
May, 2020
206
October, 2019
164
July, 2018
105
August, 2021
96
May, 2019
79
July, 2019
79
November, 2018
77
December, 2017
72
September, 2018
64
April, 2019
57
November, 2019
49
April, 2018
47
October, 2018
40
May, 2024
35
February, 2023
31
February, 2018
30
December, 2018
26
January, 2019
16
March, 2020
14
October, 2017
12
May, 2023
7
August, 2020
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
3
September, 2020
2
March, 2019
Available data
40
bigWig
40
fastq
39
bam
33
bed narrowPeak
27
bigBed narrowPeak
6
tagAlign
5
tsv
4
bed broadPeak
Organism
40
Homo sapiens
Biosample type
20
cell line
20
tissue
Organ
15
blood
15
bodily fluid
7
brain
7
spleen
5
liver
5
pancreas
1
adipose tissue
1
connective tissue
Project
40
AMP
Genome assembly (visualization)
40
GRCh38
39
hg19
Lab
39
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
3
missing controlled_by
assay_title!
Hi-C
BIOSAMPLE
ASSAY
40 results
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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
cell line
GM12878
15
HepG2
5
tissue
spleen
6
1
brain
6
body of pancreas
4
cerebellum (Hemisphere)
1
islet of Langerhans
1
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