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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
116
total RNA-seq
48
single cell RNA-seq
8
ATAC-seq
6
ChIP-seq
Assay category
164
Transcription
8
DNA accessibility
6
DNA binding
Target of assay
6
histone
6
histone modification
5
broad histone mark
1
narrow histone mark
Date released
568
February, 2021
280
November, 2017
276
May, 2021
249
August, 2017
210
June, 2019
207
May, 2020
206
October, 2019
164
July, 2018
105
August, 2021
96
May, 2019
79
July, 2019
79
November, 2018
77
December, 2017
72
September, 2018
64
April, 2019
57
November, 2019
49
April, 2018
47
October, 2018
40
May, 2024
35
February, 2023
31
February, 2018
30
December, 2018
26
January, 2019
16
March, 2020
14
October, 2017
12
May, 2023
7
August, 2020
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
3
September, 2020
2
March, 2019
Available data
178
bigWig
177
bam
164
tsv
64
fastq
12
bed narrowPeak
6
bigBed narrowPeak
6
tagAlign
4
bed broadPeak
Organism
178
Homo sapiens
Biosample type
130
tissue
48
primary cell
Organ
158
pancreas
33
epithelium
7
brain
3
connective tissue
1
adipose tissue
1
spleen
Project
178
AMP
Genome assembly (visualization)
178
GRCh38
177
hg19
Lab
177
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
6
inconsistent ontology term
Audit category:
3
missing controlled_by
assay_title!
Hi-C
BIOSAMPLE
ASSAY
178 results
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Clear Filters
total RNA-seq
single cell RNA-seq
ATAC-seq
ChIP-seq
tissue
islet of Langerhans
116
1
brain
6
body of pancreas
4
cerebellum (Hemisphere)
1
omental fat pad
1
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primary cell
pancreatic beta cell
9
pancreatic alpha cell
7
pancreatic acinar cell
5
pancreatic delta cell
4
pancreatic cell
3
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