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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
62
total RNA-seq
12
ATAC-seq
1
pCHi-C
Assay category
62
Transcription
12
DNA accessibility
Date released
66
February, 2021
8
February, 2023
1
May, 2021
Available data
66
bam
58
bigWig
58
tsv
8
bed narrowPeak
4
bed bed3
4
txt
Organism
75
Homo sapiens
Biosample type
74
tissue
1
primary cell
Organ
857
pancreas
786
liver
664
connective tissue
490
adipose tissue
426
epithelium
384
heart
330
kidney
280
brain
230
vasculature
225
blood vessel
141
artery
117
limb
81
musculature of body
75
bone element
69
blood
69
bodily fluid
61
eye
43
nerve
31
embryo
25
spleen
20
lung
20
vein
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
Project
74
AMP
1
T1D
Genome assembly (visualization)
70
hg19
66
GRCh38
Lab
74
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
inconsistent ontology term
assay_title!
Hi-C
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
75 results
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total RNA-seq
ATAC-seq
pCHi-C
tissue
bone tissue
58
acetabular part of hip bone
1
1
ilium
1
1
ischium
1
1
pubis
1
1
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primary cell
megakaryocyte
1
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