Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
total RNA-seq
4
pCHi-C
3
ChIP-seq
1
ATAC-seq
1
RRBS
Assay category
19
Transcription
3
DNA binding
1
DNA accessibility
1
DNA methylation
Target of assay
2
histone
2
histone modification
2
narrow histone mark
1
control
Date released
21
October, 2019
4
February, 2023
1
February, 2020
1
July, 2019
1
June, 2019
Available data
bed narrowPeak
7
bam
6
bigBed narrowPeak
6
bigWig
5
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
28
Homo sapiens
Biosample type
26
tissue
2
primary cell
Organ
723
pancreas
608
connective tissue
478
adipose tissue
365
epithelium
346
liver
199
heart
170
kidney
151
bone element
98
vasculature
96
blood vessel
80
brain
67
artery
30
musculature of body
28
eye
26
limb
23
embryo
20
lung
16
nerve
15
blood
15
bodily fluid
11
spleen
8
skeleton
7
vein
5
gonad
5
ovary
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
28
AMP
Genome assembly (visualization)
1
hg19
Lab
28
AMP-T2D consortium
assay_title!
Hi-C
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
28 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
pCHi-C
ChIP-seq
ATAC-seq
RRBS
tissue
islet of Langerhans
14
4
2
1
retina
3
pigmented layer of retina
2
primary cell
retinal pigment epithelial cell
1
1
Download