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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
38
ChIP-seq
3
DNase-seq
2
ATAC-seq
Hi-C
2
WGBS
1
FAIRE-seq
1
pCHi-C
Assay category
38
DNA binding
6
DNA accessibility
2
DNA methylation
Target of assay
22
histone
22
histone modification
13
broad histone mark
10
control
9
narrow histone mark
6
transcription factor
3
other context
3
other post-translational modification
Date released
22
October, 2019
9
November, 2018
7
December, 2018
7
January, 2019
1
March, 2020
1
October, 2017
Available data
45
bam
32
bigWig
28
bed narrowPeak
26
bigBed narrowPeak
24
fastq
5
bed broadPeak
5
bigBed broadPeak
3
bed bed3+
2
bed bedMethyl
2
bigBed bedMethyl
1
tagAlign
1
tar
1
tsv
Organism
47
Homo sapiens
Biosample type
27
tissue
20
primary cell
Organ
937
pancreas
787
liver
683
connective tissue
516
epithelium
491
adipose tissue
390
heart
353
kidney
283
brain
231
vasculature
225
blood vessel
159
bone element
141
artery
118
limb
90
musculature of body
69
blood
69
bodily fluid
61
eye
43
nerve
37
embryo
25
spleen
20
lung
20
vein
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
47
AMP
Genome assembly (visualization)
30
hg19
29
GRCh38
Lab
47
AMP-T2D consortium
assay_title!
Hi-C
BIOSAMPLE
ASSAY
47 results
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ChIP-seq
DNase-seq
ATAC-seq
WGBS
FAIRE-seq
pCHi-C
tissue
spleen
20
1
1
2
1
islet of Langerhans
1
pituitary gland
1
primary cell
endothelial cell of umbilical vein
17
2
1
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